Can I manage physical inventory like freezers and plates?

Absolutely. The skill supports full inventory management, including creating containers, boxes, and managing transfers between storage locations.

Can I use this for event-driven automation?

Yes, it includes patterns for setting up integrations with AWS EventBridge to respond to real-time changes in Benchling, such as entity creation or status changes.

Does this skill require a Benchling account?

Yes, you need an active Benchling tenant and either an API key or OAuth credentials to interact with the platform through this skill.

Is it secure to use my API keys with this skill?

The skill follows security best practices by recommending the use of environment variables or secure credential managers rather than hardcoding keys in your scripts.

How does this handle sequence data?

It uses the Benchling Python SDK to create, update, and register DNA, RNA, and amino acid sequences with support for custom schema fields and metadata.

Benchling R&D Integration

Name: Benchling R&D Integration
Author: Activer007

byActiver007

0•

Data Science & ML

Connects Claude to the Benchling life sciences platform to automate R&D data management, registry updates, and laboratory workflows.

This skill provides comprehensive integration with the Benchling cloud platform, allowing researchers and bioinformaticians to programmatically manage biological sequences, inventory, and electronic lab notebook (ELN) entries. It leverages the Benchling Python SDK and REST API to automate repetitive lab operations, sync data between external systems, and build event-driven laboratory workflows. Whether you are managing complex DNA registries or querying the Benchling Data Warehouse for analytics, this skill streamlines the interaction between AI-assisted coding and life sciences R&D data.

Key Features

010 GitHub stars

02Workflow task automation and status tracking for laboratory processes

03Full Registry management for DNA, RNA, and protein sequences

04Electronic Lab Notebook (ELN) entry creation and documentation management

05Data Warehouse access for SQL-based analytics and reporting

06Laboratory inventory automation for samples, containers, and storage locations

Use Cases

01Syncing experimental results between Benchling and external bioinformatic analysis pipelines

02Bulk importing and registering biological sequences from FASTA or other external files

03Automating sample transfers and inventory audits within the laboratory

What are Skills?·How to Install

Install with 🐟 Skill.Fish

npx skillfish add activer007/ordinary-claude-skills benchling-integration

For use in Claude.ai and ChatGPT

Download Skill