How does the skill handle LabArchives authentication?

The skill utilizes a combination of an API Access Key ID, Access Password, and User Authentication credentials, following LabArchives' REST API security protocols.

Does this skill support regional LabArchives servers?

Yes, the skill includes configuration support for US/International (api.labarchives.com), Australia (auapi.labarchives.com), and UK (ukapi.labarchives.com) regional endpoints.

What kind of files can I upload to my lab notebook using this skill?

It supports a wide range of file types including standard documents (PDF, DOCX), images, data files (CSV, HDF5), and specialized scientific formats like MOL and PDB.

Is it possible to integrate Jupyter Notebooks with LabArchives?

Yes, the skill facilitates workflows where Jupyter exports can be automatically uploaded as notebook entries, including execution timestamps and environment metadata.

Can I automate the backup of an entire notebook?

Absolutely. The skill provides specific scripts and API workflows to download complete notebook data, including options for 7z archives with or without attachments.

LabArchives ELN Integration

Name: LabArchives ELN Integration
Author: BbgnsurfTech

byBbgnsurfTech

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Data Science & ML

Automates electronic lab notebook management through the LabArchives REST API for research documentation, data backups, and institutional reporting.

This skill provides a comprehensive interface for Claude to interact programmatically with LabArchives, the leading electronic lab notebook (ELN) platform. It enables seamless management of research documentation by facilitating API authentication across regional endpoints, automating the creation of notebook entries, and managing complex file attachments. Ideal for researchers and data managers, it streamlines workflows between LabArchives and third-party tools like Jupyter or REDCap, ensures data integrity through automated backups, and generates detailed institutional usage analytics for compliance and oversight.

Key Features

01Regional API endpoint support for US, Australia, and UK instances

02Third-party integration support for Jupyter, Protocols.io, and REDCap

03Institutional report generation for usage and compliance auditing

04Programmatic entry creation and multi-format attachment management

05Automated notebook backup and metadata retrieval capabilities

063 GitHub stars

Use Cases

01Managing user permissions and notebook access across large research institutions through API automation.

02Automating the synchronization of experimental results from computational environments like Jupyter to LabArchives entries.

03Scheduling programmatic full-notebook backups to secure local storage for long-term research archival.

What are Skills?·How to Install

Install with 🐟 Skill.Fish

npx skillfish add bbgnsurftech/claude-skills-collection labarchive-integration

For use in Claude.ai and ChatGPT

Download Skill