Browse All Agent Skills

DiffDock Molecular Docking

Performs state-of-the-art diffusion-based molecular docking to predict 3D binding poses of ligands to protein targets.

Automated Code Review Request

Automates the process of dispatching specialized subagents to review code changes and identify technical issues before merging.

Biopython Molecular Biology

Facilitates computational molecular biology tasks including sequence manipulation, NCBI database access, and structural bioinformatics analysis.

Adaptyv Protein Validation

Automates protein testing and validation by connecting computational designs to cloud-based laboratory experiments and optimization tools.

ETE Toolkit Phylogenetic Analysis

Manipulates, analyzes, and visualizes phylogenetic trees with advanced support for evolutionary event detection and NCBI taxonomy integration.

Statsmodels Statistical Modeling

Performs rigorous statistical modeling, econometric analysis, and hypothesis testing using the Python statsmodels library.

Prompt Engineering Patterns

Implements advanced prompt design techniques to maximize LLM performance, reliability, and token efficiency across all interactions.

Saga Orchestration Patterns

Implements robust saga patterns for managing distributed transactions and long-running business processes across microservices.

deepTools NGS Analysis

Processes and analyzes high-throughput sequencing data (NGS) to generate publication-quality visualizations and quality control metrics.

Datamol Cheminformatics

Simplifies molecular cheminformatics workflows by providing a Pythonic wrapper around RDKit with sensible defaults and parallel processing.

Arboreto GRN Inference

Infers gene regulatory networks from transcriptomics data using scalable machine learning algorithms like GRNBoost2 and GENIE3.

NeuroKit2 Biosignal Processing

Analyzes and processes physiological signals including ECG, EEG, and EDA using the comprehensive NeuroKit2 Python library.

PyLabRobot Automation

Automates laboratory workflows and hardware control through a unified, hardware-agnostic Python interface.

DeepChem Molecular ML

Facilitates molecular machine learning and drug discovery workflows using the DeepChem toolkit.

Quality Documentation Manager

Manages comprehensive quality document control and regulatory compliance for medical device organizations using systematic change management and configuration control.

PyDESeq2 Differential Expression

Performs robust differential gene expression analysis for bulk RNA-seq data using the Python implementation of DESeq2.

UV Python Package Manager

Accelerates Python development workflows by leveraging the ultra-fast uv package manager for dependency resolution, environment management, and project initialization.

JUnit 5 Utility & Static Method Testing

Automates the creation of comprehensive JUnit 5 tests for static utility classes and pure functions.

Bioinformatics BioServices

Streamlines access to over 40 bioinformatics web services for integrated biological data retrieval and analysis.

GeoPandas Geospatial Analysis

Extends pandas with geometric operations and spatial data structures for advanced geospatial analysis and mapping.

JSON Serialization Unit Testing

Automates the validation of Java object mapping to JSON and vice versa using Spring Boot's @JsonTest and Jackson.

PufferLib Reinforcement Learning

Builds and trains high-performance reinforcement learning agents using optimized vectorization and multi-agent simulation.

Scikit-bio Bioinformatics Toolkit

Performs comprehensive biological data analysis, including sequence manipulation, phylogenetics, and microbiome ecology statistics.

Java Mapper & Converter Unit Testing

Generates and validates comprehensive unit tests for MapStruct mappers and custom data converters.

Hypogenic Scientific Hypothesis Generator

Automates scientific hypothesis generation and testing by combining observational data with literature-based insights using large language models.

PennyLane Quantum Computing

Enables building, training, and optimizing quantum circuits and hybrid quantum-classical machine learning models with automatic differentiation.

Scientific Peer Review

Evaluates scientific manuscripts and grant proposals for methodological rigor, statistical accuracy, and reporting standards.

Unit Test Bean Validation

Simplifies testing of Jakarta Bean Validation constraints and custom validators using JUnit 5 and AssertJ.

Lead Research Assistant

Automates lead discovery and market analysis by examining your codebase to identify high-priority target companies and personalized outreach strategies.

TorchDrug for Molecular Science

Accelerates drug discovery and molecular modeling using graph neural networks and curated biological datasets within PyTorch.