Data Science & ML Agent Skills

ClinVar Genomic Database Assistant

Interfaces with NCBI ClinVar to query, interpret, and process human genetic variant clinical significance data for genomic medicine.

DrugBank Database Explorer

Accesses and analyzes comprehensive pharmaceutical data from the DrugBank database for drug discovery and pharmacology research.

BioServices Bioinformatics Suite

Accesses and integrates data from over 40 bioinformatics web services and databases using a unified Python API.

Benchling Integration

Automates life sciences R&D workflows by integrating Benchling's registry, inventory, and electronic lab notebook via API and Python SDK.

Biopython Bioinformatics Toolkit

Provides specialized tools for biological computation, sequence analysis, and programmatic access to NCBI databases using Biopython.

Biopython Bioinformatics Toolkit

Streamlines computational molecular biology tasks including sequence analysis, NCBI database integration, and structural protein modeling.

bioRxiv Database Search

Accesses and searches the bioRxiv preprint server to retrieve life sciences research metadata and download full-text PDFs.

BioRxiv Search & Retrieval

Automates searching, metadata extraction, and PDF downloads from the bioRxiv preprint server for life sciences research.

BioServices Bioinformatics Integration

Access over 40 bioinformatics web services and databases including UniProt, KEGG, and ChEMBL through a unified Python interface.

Benchling R&D Integration

Automates laboratory data management and life sciences R&D workflows by integrating with the Benchling platform via Python SDK and REST API.

ClinVar Database Integration

Queries and interprets NCBI ClinVar data to evaluate human genetic variant pathogenicity and clinical significance for genomic medicine.

PyTorch AT_DISPATCH_V2 Converter

Migrates legacy PyTorch AT_DISPATCH macros to the modern Dispatch_v2 format in ATen C++ codebases.

Astropy Research & Data Analysis

Simplifies astronomical data processing and astrophysical calculations using the core Python Astropy library.

Molfeat Molecular Featurization

Standardizes and automates molecular featurization to convert chemical structures into machine-learning-ready numerical representations.

PyTorch ATen Dispatch V2 Converter

Automates the migration of legacy PyTorch AT_DISPATCH macros to the modern AT_DISPATCH_V2 API.

arXiv Search

Searches the arXiv preprint repository for scholarly articles across various scientific and technical domains.

Astropy Mastery

Streamlines astronomical data analysis and astrophysical calculations using the core Astropy Python library.

Astropy Astronomical Analysis

Facilitates advanced astronomical research and data processing through Python-based coordinate transforms, FITS manipulation, and cosmological modeling.

DNAnexus Genomics Integration

Develops, deploys, and manages genomics pipelines and biomedical data on the DNAnexus cloud platform.

Biopython Bioinformatics

Simplifies molecular biology tasks using the Biopython library for sequence analysis, structural bioinformatics, and database integration.

ESM Protein Design & Modeling

Enables advanced protein engineering, sequence generation, and structure prediction using Evolutionary Scale Modeling.

Financial Modeling Suite

Generates sophisticated financial models including DCF analysis, Monte Carlo simulations, and sensitivity testing for investment decision-making.

Arboreto GRN Inference

Infers gene regulatory networks from transcriptomics data using scalable machine learning algorithms like GRNBoost2 and GENIE3.

Benchling Integration

Integrates Benchling’s R&D platform with Claude to automate life sciences workflows, manage biological registries, and streamline lab data operations.

Model Registry Maintainer

Manages AI model configurations, pricing, and capabilities within backend registries for LLM-powered applications.

ClinicalTrials.gov Search & Analytics

Queries the ClinicalTrials.gov API v2 to search for trials, analyze research trends, and extract detailed study data.

Moon Dev AI Trading Agents

Orchestrates a fleet of over 48 specialized AI agents to automate cryptocurrency trading, market analysis, and backtesting across multiple exchanges.

ClinicalTrials.gov Database Navigator

Queries the ClinicalTrials.gov API v2 to search, filter, and extract global clinical study data for medical research and patient matching.

Arboreto Gene Regulatory Network Inference

Infers gene regulatory networks from transcriptomics data using scalable gradient boosting and random forest algorithms.

Moon Dev AI Trading Agents

Orchestrates over 48 specialized AI agents for autonomous cryptocurrency trading, market analysis, and backtesting across multiple exchanges.