Data Science & ML Agent Skills

ClinicalTrials.gov Database Navigator

Queries the ClinicalTrials.gov API v2 to search, filter, and extract global clinical study data for medical research and patient matching.

Datamol Cheminformatics

Simplifies molecular cheminformatics and drug discovery workflows using a Pythonic wrapper for RDKit.

Moon Dev AI Trading Agents

Orchestrates over 48 specialized AI agents for autonomous cryptocurrency trading, market analysis, and backtesting across multiple exchanges.

ClinicalTrials.gov Database Connector

Queries the ClinicalTrials.gov API v2 to search, retrieve, and analyze clinical trial data for research and patient matching.

Biomni Biomedical Research Agent

Automates complex biomedical research tasks including genomics, drug discovery, and clinical data analysis using an autonomous AI agent framework.

OpenAlex Academic Database

Queries and analyzes over 240 million scholarly works, authors, and institutions via the OpenAlex API.

Scanpy Single-Cell Analysis

Performs comprehensive single-cell RNA-seq analysis including quality control, clustering, and cell type annotation using the Scanpy framework.

Benchling Lab Integration

Automates life sciences research data management by integrating Claude with the Benchling R&D platform's registry, inventory, and notebooks.

DrugBank Database Analysis

Provides programmatic access and comprehensive analysis of the DrugBank database for pharmaceutical research and bioinformatics workflows.

Aeon Time Series Machine Learning

Provides specialized algorithms and workflows for advanced time series tasks including forecasting, classification, and anomaly detection.

Benchling R&D Integration

Automates life sciences research workflows by integrating Benchling's registry, inventory, and notebook systems via Python SDK and REST API.

Benchling R&D Integration

Automates laboratory data management and life sciences R&D workflows by integrating with the Benchling platform via Python SDK and REST API.

ClinicalTrials.gov Database

Queries the ClinicalTrials.gov API to search for medical studies, retrieve trial details, and export structured clinical research data.

ArXiv Research Search

Searches the arXiv preprint repository for scholarly articles in computer science, physics, mathematics, and quantitative biology.

Biomni Biomedical Agent

Executes complex autonomous biomedical research tasks including genomics, drug discovery, and clinical data analysis.

Denario AI Research Orchestrator

Automates end-to-end scientific research workflows from initial data analysis and hypothesis generation to the production of publication-ready LaTeX manuscripts.

Bioinformatics Toolkit (gget)

Retrieves genomic, transcriptomic, and proteomic data from 20+ bioinformatics databases using a unified interface.

DrugBank Database Integration

Accesses and analyzes comprehensive pharmaceutical data from DrugBank, including drug properties, interactions, targets, and chemical structures.

Data Visualization Plots

Generates publication-quality scientific visualizations and data plots locally using Python's Matplotlib and Seaborn libraries.

RAG Implementation Pro

Builds high-performance Retrieval-Augmented Generation systems using vector databases, semantic search, and advanced retrieval patterns.

Ensembl Genome Database

Queries the Ensembl REST API to retrieve gene annotations, sequences, variants, and comparative genomics data for over 250 species.

ML Pipeline Workflow

Builds end-to-end MLOps pipelines for data preparation, model training, validation, and production deployment.

Flow Nexus Neural Networks

Trains and deploys sophisticated neural network architectures across distributed E2B sandbox environments.

Arboreto GRN Inference

Infers gene regulatory networks from transcriptomics data using scalable machine learning algorithms like GRNBoost2 and GENIE3.

bioRxiv Database Search

Accesses and searches the bioRxiv preprint server to retrieve life sciences research metadata and download full-text PDFs.

DrugBank Database Analysis

Accesses and analyzes comprehensive pharmaceutical data from DrugBank including drug properties, interactions, and molecular structures.

ML Pipeline Workflow

Builds end-to-end MLOps pipelines from data preparation through model training, validation, and production deployment.

AgentDB Vector Search

Implements ultra-high-performance semantic vector search and document retrieval for Claude-powered RAG systems and intelligent knowledge bases.

Denario Scientific Research Automation

Automates the end-to-end scientific research lifecycle from data analysis and hypothesis generation to publication-ready LaTeX manuscripts.

LLM Performance Evaluation

Implements comprehensive evaluation strategies for LLM applications using automated metrics, human feedback, and benchmarking.