Data Science & ML Agent Skills

deepTools NGS Analysis

Analyzes and visualizes high-throughput sequencing data including ChIP-seq, RNA-seq, and ATAC-seq.

FluidSim CFD Framework

Simulates high-performance computational fluid dynamics using pseudospectral methods and optimized Python solvers.

Polars Data Engineering

Optimizes data processing and analysis workflows using the high-performance Polars DataFrame library.

LatchBio Integration

Streamlines the development, deployment, and management of serverless bioinformatics workflows on the LatchBio platform.

Geniml: Genomic Machine Learning

Builds machine learning models and embeddings for genomic interval data to enable similarity searches, clustering, and single-cell analysis.

Matplotlib Visualization

Generates and customizes professional-grade static, animated, and interactive visualizations using Python's foundational plotting library.

ReasoningBank Agent Learning

Implements adaptive learning and high-speed memory patterns for self-improving Claude Code agents using AgentDB.

AI Core Command Center

Deploys and manages a self-hosted AI infrastructure stack including LLM proxies, inference servers, vector databases, and observability tools.

xAI Sentiment Analysis

Performs real-time sentiment analysis on Twitter/X content using Grok's native integration and natural language processing.

Miles RL Training Framework

Provides expert guidance and implementation patterns for training large-scale Mixture-of-Experts (MoE) models using enterprise-grade Reinforcement Learning.

PyDESeq2 Gene Analysis

Performs differential gene expression analysis for bulk RNA-seq data using Python-based DESeq2 workflows.

Python Practice Tutor

Generates customized Jupyter notebook practice challenges for Python algorithms and pandas data manipulation.

ClinPGx Pharmacogenomics Database

Queries gene-drug interactions, clinical guidelines, and genetic variant annotations from the ClinPGx database for precision medicine applications.

Bioinformatics Data Query (gget)

Accesses and analyzes data from over 20 genomic and proteomic databases through a unified interface.

LLM Auto-Update

Automatically synchronizes the latest LLM model specifications, pricing, and API documentation to ensure optimal architecture decisions.

ClinicalTrials.gov Search & Integration

Queries the ClinicalTrials.gov API v2 to search, filter, and extract comprehensive clinical research data and trial details.

LangChain Architecture & Agent Design

Architects sophisticated LLM applications using LangChain patterns for agents, memory management, and complex tool integration.

Agentica SDK

Builds and orchestrates stateful Python-based AI agents with MCP integration and multi-agent patterns.

LLM Evaluation & Testing

Implements comprehensive evaluation strategies for LLM applications using automated metrics, human feedback, and LLM-as-judge patterns.

Alpha Vantage Financial Data

Accesses comprehensive financial market data including stocks, forex, cryptocurrency, and technical indicators for automated analysis.

Context Optimization for AI Agents

Optimizes LLM context windows through compaction, masking, and caching strategies to maximize performance and minimize token costs.

SHAP Model Interpretability

Explains machine learning model predictions and feature importance using Shapley Additive exPlanations for transparent AI.

Prompt Engineering Patterns

Implements advanced prompt engineering techniques to optimize LLM performance, reliability, and output controllability in production environments.

LLM Evaluation Suite

Implements comprehensive evaluation frameworks for LLM applications using automated metrics, human feedback, and benchmarking.

Context Optimization

Optimizes LLM context windows through strategic compaction, masking, and caching to improve model performance and reduce costs.

K-Dense Scientific Research Bridge

Connects Claude Scientific Skills with the K-Dense Web platform to handle complex, multi-agent scientific research workflows.

Gemini Web Integration

Enables high-quality text and image generation using a reverse-engineered Gemini Web API interface.

xAI Agent Tools for Grok

Enables autonomous tool calling for Grok models including X search, web search, and Python code execution.

LangChain Architecture

Designs and implements sophisticated LLM applications using the LangChain framework for agents, memory management, and modular workflows.

LangChain Architecture Assistant

Designs and implements sophisticated LLM applications using the LangChain framework for agents, memory, and complex workflows.