Data Science & ML Agent Skills

AgentDB Vector Search

Implements high-performance semantic vector search and document retrieval using AgentDB's ultra-fast HNSW indexing and quantization.

COSMIC Cancer Database Access

Accesses and manages the COSMIC somatic mutation database for cancer research and precision oncology workflows.

deepTools Bioinformatics Suite

Processes and visualizes high-throughput sequencing data for genomics research and quality control.

LatchBio Integration

Builds, deploys, and manages serverless bioinformatics workflows using the Latch SDK and cloud infrastructure.

Benchling R&D Integration

Connects Claude to the Benchling life sciences platform to automate R&D data management, registry updates, and laboratory workflows.

ClinicalTrials.gov Explorer

Accesses and queries the ClinicalTrials.gov API v2 to retrieve comprehensive data on global clinical studies.

Hypogenic Hypothesis Discovery

Automates scientific hypothesis generation and testing on tabular datasets by combining empirical data patterns with literature insights.

Statistical Analysis Guide

Guides users through statistical test selection, assumption verification, and APA-formatted research reporting.

System Skill Source

Implements the System Skill Pattern to build persistent, data-driven CLI tools that evolve through continuous user interaction.

Copper Supply Risk Analyzer

Quantifies global copper supply concentration and structural risks using automated data scraping and Bloomberg-style visualizations.

Aeon Time Series ML

Provides a comprehensive suite of specialized algorithms for time series machine learning including classification, forecasting, and anomaly detection.

Benchling Integration

Integrates Claude with the Benchling R&D platform to automate life sciences data management, laboratory inventory, and electronic notebook entries.

Denario Scientific Research Automation

Automates end-to-end scientific research workflows from data analysis and hypothesis generation to publication-ready LaTeX manuscripts.

Excel & Spreadsheet Automation

Generates, edits, and analyzes complex Excel workbooks using dynamic formulas, professional financial formatting, and automated data validation.

Claude Opus 4.5 Migration Guide

Migrates codebases and prompts from Claude Sonnet 4.0, 4.5, or Opus 4.1 to the Opus 4.5 model across multiple platforms.

LlamaFarm Service Control: Stop

Manages the graceful termination of LlamaFarm backend services and background RAG workers.

ZINC Database Access

Connects Claude to the ZINC22 database to perform chemical compound searches, virtual screening, and drug discovery workflows.

Scientific Literature Reviewer

Conducts systematic, comprehensive literature reviews across multiple scientific databases with verified citations and professional formatting.

GWAS Database Integration

Queries the NHGRI-EBI GWAS Catalog to retrieve genetic variant associations, trait data, and genomic summary statistics.

ETE Phylogenetic Toolkit

Manipulates, analyzes, and visualizes phylogenetic and hierarchical trees with seamless NCBI taxonomy integration.

SymPy Symbolic Mathematics

Performs exact symbolic mathematical computations including algebra, calculus, and physics modeling directly in Python.

Medchem Molecular Filtering

Applies medicinal chemistry rules, structural alerts, and drug-likeness filters to prioritize compound libraries for drug discovery.

Workers AI

Provides expert guidance on implementing AI models, generating embeddings, and building Retrieval Augmented Generation (RAG) systems using Cloudflare’s serverless AI platform.

Fal AI Audio Integration

Enables high-quality text-to-speech and speech-to-text capabilities using fal.ai's suite of specialized audio models.

Metabolomics Workbench Database

Accesses the NIH Metabolomics Workbench to query metabolite structures, experimental studies, and mass spectrometry data.

Metabolomics Workbench Explorer

Accesses the NIH Metabolomics Workbench API to retrieve experimental study data, metabolite structures, and standardized biochemical nomenclature.

Scientific Hypothesis Generator

Formulates testable, evidence-based scientific hypotheses and experimental designs from observations using a structured framework.

ML & NLP Processing

Powers high-accuracy OCR, named entity recognition, and search reranking for document processing and RAG optimization.

Text Classification & Labeling

Classifies and categorizes text using zero-shot learning or custom-trained SetFit models for high-accuracy document labeling.

Denario Scientific Research Assistant

Automates the end-to-end scientific research pipeline from hypothesis generation to publication-ready LaTeX manuscripts.